Reference
Auto-generated Python library documentation. Each page is built from source code docstrings using mkdocstrings.
API
| Page | Description |
|---|---|
| API Overview | REST API endpoints, middleware, authentication, and configuration. |
| API Specification | Interactive OpenAPI specification (Swagger UI). |
Core Library
| Module | Description |
|---|---|
| Configuration | Root settings, environment variables, and Pydantic models. |
| DuckLake | Catalog setup, connection management, and IO manager. |
| Storage | Data persistence layer and file handling. |
| OMOP | OMOP CDM table definitions and transformations. |
| FHIR | FHIR translator registry, loader, and configuration. |
| Ingestion | Data ingestion services and validation pipeline. |
| Utilities | Shared helpers: logging, formatting, and common functions. |